Thursday, February 2, 2017

Genetics 2017 Week 2: Studying Genetic Variation

Studying Genetic Variation - Notes


  • Autosomal dominant - the disease carries in one of the 22 chromosomes that's not a sex chromosome, and because it's dominant having one copy is sufficient to produce the disease phenotype.  
    • In this type of inheritance pattern, half the offspring would get the disease.
    • Variable penetrance - not every person who has the genetic abnormality will get the disease.
  • Autosomal recessive -
    • With diseases carried on recessive genes, both parents have to carry the gene with disease and both have to pass it on, so this would affect about 25% of offspring.  
    • This mostly happens when parents are related, or when the gene that carries disease is common in the entire population.  
  • Why children's DNA varies from parents:
    • To start, you get one chromosome from each parent
    • Then, each of us has about 100 De Novo mutations (usually 1 in coding regions).
    • Over generations, the DNA looks less and less like ancestors.
Genome Wide Association
  • 30 million base pairs - lots to cover.  But now you can get it done for a couple hundred dollars.
  • This is a way to study genetic variance with large population rather than family history - you find the phenotype first and then check their genes.
  • He gave examples of different phenotypes located on different chromosomes, and one of the examples was that variations on the 4th chromosome are 3 times more likely to cause atrial fibrillation.  (But it's still unusual.)
  • Uses for Genome wide association studies:
    • Analyze heritability
    • Identify new drug targets
    • Predict risk (single or multiple variants)
    • Subclassify disease
    • Understand and maybe prevent adverse drug reactions

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